Thank you for the explanation. Another question that I haven't been able to find an answer for. Why does removing the fuse matter if there is nothing plugged into the port?
Because the fuse supplies 5V to both USB-A1 (unused) and to the USB hub (which is supposed to get 3.3V).
Removing it makes USB-A1 unpowered (we don't care) and stops the overvoltage of the USB hub (which is okay with 0V/GND on this pin).
From the link to github I read BitSyncom answer where he says: "Thanks, this is true, will cause the chip to be about ~20C higher than avg, which is still fine [...]"
So, adding a small heat sink could be a "simpler" solution, isn't it?
With all due respect to Yifu, I think he is too negligent here. I don't think it is "fine". We all saw senseless' picture of a
melting chip package. And nobody has enough data to proves whether a heatsink is sufficient or not. Even if it helps, the chip's pin input is still being overvolted, so it is still reducing its operating life...