Until now the default relay fee rules and default mining fee have been the same. It remains to be seen how the miners react.
If we lower the fee right now we will probably get a lot of unhappy users (blaming our software) because nothing confirms. 0.9 is just out and it will take some time until it has proliferated, and we will have to see whether miners actively set the mining fee below the standard.
I have no problem with a base fee of 0.0001 BTC
Even at $1000/btc, that's only 10 cents (U.S.) per transaction. At current prices, closer to 6 cents. Still cheaper than a bank wire, and worth it for anyone not trying to make micropayments (which Bitcoin really wasn't designed for anyway.)
While saving coins is always a plus, don't feel rushed to lower the fee anytime soon.